STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbx2Pre-B-cell leukemia transcription factor 2. (398 aa)    
Predicted Functional Partners:
HoxB1aa
Homeobox protein HoxB1aa.
    
 0.800
hoxb1aa
Homeobox protein HoxB1ab.
    
 0.800
LOC106605278
Ral guanine nucleotide dissociation stimulator-like 2 isoform X1.
      
 0.798
LOC106581948
Ral guanine nucleotide dissociation stimulator-like 2 isoform X1.
      
 0.798
LOC106605251
PHD finger protein 1-like.
      
 0.786
ENSSSAP00000098802
PHD finger protein 1.
      
 0.786
HoxC1ab
Homeobox protein HoxC1ab.
   
 0.746
brd2
Bromodomain containing 2 isoform X7.
   
  
 0.742
LOC106560216
Homeobox protein Meis1-like.
   
 0.740
meis2
Homeobox protein Meis2 isoform X4.
   
0.740
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.