Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607014Envoplakin-like. (2006 aa)    
Predicted Functional Partners:
LOC106564908
Envoplakin-like.
     
  0.819
LOC106588289
Envoplakin-like.
     
  0.819
ppl
Periplakin.
   
 
 0.719
LOC106599708
Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.696
LOC106569170
Desmocollin-2-like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.696
LOC106560389
Desmocollin-2-like isoform X1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.696
LOC106572161
Kazrin-like isoform X1.
    
 0.688
LOC106567389
Kazrin-like.
    
 0.688
LOC106582810
Kazrin-like isoform X1.
    
 0.688
LOC106565964
Kazrin-like isoform X1.
    
 0.688
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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