STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572133Transcription factor HES-4-B-like isoform X1. (290 aa)    
Predicted Functional Partners:
FANCA
Fanconi anemia group A protein isoform X4.
    
 0.979
fancl
E3 ubiquitin-protein ligase FANCL isoform X1.
    
 0.979
fancc
Fanconi anemia group C protein isoform X1.
    
  0.977
fance
Fanconi anemia group E protein isoform X1.
    
  0.916
fancd2
Fanconi anemia group D2 protein.
     
 0.906
fanci
Fanconi anemia group I protein.
     
  0.900
fancg
Fanconi anemia group G protein isoform X3.
   
 
 0.900
UBE2T
Ubiquitin-conjugating enzyme E2 T.
    
  0.801
apitd1
Centromere protein S.
     
  0.800
faap24
Fanconi anemia-associated protein of 24 kDa.
     
  0.800
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.