Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561596Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (736 aa)    
Predicted Functional Partners:
gsr
Zinc transporter 9.
  
  
 0.803
slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 
 0.696
slc1a5
Neutral amino acid transporter B(0).
    
 0.663
calm2-3
4F2 cell-surface antigen heavy chain.
   
 
 0.605
LOC106608835
Y+L amino acid transporter 2-like.
  
  
 0.592
STX2
LOW QUALITY PROTEIN: syntaxin-2; Belongs to the syntaxin family.
   
 0.563
STX2-2
Syntaxin-2-like isoform X1; Belongs to the syntaxin family.
   
 0.563
anx2a
Annexin.
      
 0.557
ENSSSAP00000023931
Annexin A2b.
      
 0.557
LOC106610534
Solute carrier family 43 member 3-like.
      
 0.497
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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