STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561596Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (736 aa)    
Predicted Functional Partners:
gsr
Zinc transporter 9.
  
  
 0.759
slc3a1
Neutral and basic amino acid transport protein rBAT.
   
 
 0.671
slc1a5
Neutral amino acid transporter B(0).
     
 0.655
LOC106608835
Y+L amino acid transporter 2-like.
  
  
 0.639
calm2-3
4F2 cell-surface antigen heavy chain.
   
 
 0.568
ENSSSAP00000089086
Telomere repeat binding bouquet formation protein 2.
    
 
 0.476
slc18a2
Synaptic vesicular amine transporter.
   
 
 0.469
LOC106576938
Synaptic vesicular amine transporter-like isoform X1.
   
 
 0.469
tmm27
Collectrin precursor.
    
 
 0.451
slc15a5
Solute carrier family 15 member 5.
      
 0.451
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.