Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106564532Nuclear factor interleukin-3-regulated protein-like. (431 aa)    
Predicted Functional Partners:
LOC106585703
Nuclear receptor ROR-beta-like isoform X2.
    
 0.811
LOC106580068
Nuclear receptor ROR-beta-like.
    
 0.811
LOC106605122
Serine/threonine-protein kinase 40-like.
   
  0.719
LOC106583156
Serine/threonine-protein kinase 40 isoform X2.
   
  0.719
COX2
Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]
    
  0.695
LOC106580140
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.689
LOC106585766
Cytochrome c oxidase subunit 7C, mitochondrial-like.
   
 0.689
LOC100136378
Nuclear receptor subfamily 1 group D member 2.
   
 0.682
LOC106582110
Nuclear receptor subfamily 1 group D member 2-like.
   
 0.682
LOC106588668
Nuclear receptor subfamily 1 group D member 2-like isoform X1.
   
 0.682
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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