STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608836Mitochondrial inner membrane protein OXA1L-like. (560 aa)    
Predicted Functional Partners:
COX2
Cytochrome c oxidase subunit 2; Component of the cytochrome c oxidase, the last enzyme in the mitochondrial electron transport chain which drives oxidative phosphorylation. The respiratory chain contains 3 multisubunit complexes succinate dehydrogenase (complex II, CII), ubiquinol- cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV), that cooperate to transfer electrons derived from NADH and succinate to molecular oxygen, creating an electrochemical gradient over the inner membrane that drives transmembrane transport and t [...]
   
 
 0.959
ict1
Peptidyl-tRNA hydrolase ICT1, mitochondrial; Essential peptidyl-tRNA hydrolase component of the mitochondrial large ribosomal subunit. Acts as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion, possibly in case of abortive elongation. May be involved in the hydrolysis of peptidyl-tRNAs that have been prematurely terminated and thus in the recycling of stalled mitochondrial ribosomes (By similarity). Belongs to the prokaryotic/mitochondrial release factor family. Mitochondrion-specific ribo [...]
  
 
 0.942
LOC106606250
39S ribosomal protein L12, mitochondrial-like isoform X1.
   
 
 0.927
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.903
LOC106583199
Protein transport protein Sec61 subunit alpha isoform B-like.
   
 0.903
s61a1
Salmo salar transport protein Sec61 subunit alpha (s61a1), mRNA.
   
 0.903
sc61a
Transport protein Sec61 subunit alpha.
   
 0.903
LOC106577806
Mitochondrial inner membrane protein OXA1L-like.
  
  
 
0.902
mrpl28
LOW QUALITY PROTEIN: 39S ribosomal protein L28, mitochondrial.
    
 
 0.877
ENSSSAP00000051367
annotation not available
   
 
 0.872
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (22%) [HD]