STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106561880BTB/POZ domain-containing protein 9-like isoform X3. (645 aa)    
Predicted Functional Partners:
saks1
SAPK substrate protein 1 isoform X1.
    
   0.892
LOC106612087
UBX domain-containing protein 1-like.
    
   0.892
LOC106599567
UBX domain-containing protein 7-like isoform X1.
    
   0.892
LOC106613896
FAS-associated factor 1-like isoform X1.
    
   0.892
LOC106568865
UBX domain-containing protein 7-like.
    
   0.892
LOC106584329
FAS-associated factor 1-like isoform X1.
    
   0.892
ENSSSAP00000051367
annotation not available
   
 
 0.746
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.744
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.740
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.737
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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