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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012100Major facilitator superfamily domain containing 6-like. (504 aa)    
Predicted Functional Partners:
LOC106569838
Major facilitator superfamily domain-containing protein 12-like.
      
 0.598
mfsd9
Major facilitator superfamily domain-containing protein 9.
      
 0.593
svopl
Putative transporter SVOPL.
      
 0.555
LOC106603928
Protein spinster homolog 3-like.
   
  
 0.527
LOC106579271
Transmembrane protein 180-like.
      
 0.510
LOC106578307
Transmembrane protein 180-like.
      
 0.510
mfsd8
Major facilitator superfamily domain-containing protein 8.
      
 0.508
LOC106608045
Major facilitator superfamily domain-containing protein 2B-like.
      
 0.480
LOC106571769
Major facilitator superfamily domain-containing protein 2B-like isoform X1.
      
 0.480
ENSSSAP00000085431
Renalase, FAD-dependent amine oxidase.
      
 0.470
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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