STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564727Calpain-9-like isoform X1; Belongs to the peptidase C2 family. (676 aa)    
Predicted Functional Partners:
ical
Calpastatin isoform X3.
   
 0.826
LOC101448033
Calpastatin 2 isoform X5.
   
 0.750
ENSSSAP00000076178
Calpain-15-like.
     
 0.739
capns1
Calpain small subunit 1.
   
  0.694
CAPNS1
Calpain small subunit 1.
   
  0.694
ENSSSAP00000046744
Calpain small subunit 1-like.
   
  0.694
LOC106580759
Calpain small subunit 1-like.
   
  0.694
ENSSSAP00000104517
annotation not available
   
  0.694
prmt3
Arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.548
LOC106569427
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.527
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (24%) [HD]