Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012104Solute carrier family 25 member 4. (316 aa)    
Predicted Functional Partners:
LOC106603817
Voltage-dependent anion-selective channel protein 1.
   
 0.968
LOC106577170
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.936
LOC106608573
Voltage-dependent anion-selective channel protein 2-like.
   
 0.929
LOC106611737
Voltage-dependent anion-selective channel protein 2-like.
   
 0.929
LOC106585056
Voltage-dependent anion-selective channel protein 2-like isoform X2.
   
 0.929
vdac3
Salmo salar voltage-dependent anion channel 3 (vdac3), mRNA.
   
 0.929
LOC106577200
Voltage-dependent anion-selective channel protein 2-like.
   
 0.929
vdac2
Voltage-dependent anion-selective channel protein 2.
   
 0.929
LOC106568273
Voltage-dependent anion-selective channel protein 2-like isoform X2.
   
 0.929
LOC106562702
Voltage-dependent anion-selective channel protein 2-like isoform X1.
   
 0.929
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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