STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxb8abHomeobox protein HoxB8ab isoform X2. (245 aa)    
Predicted Functional Partners:
LOC106601349
Interleukin enhancer-binding factor 3 homolog isoform X1.
     
  0.641
ilf3
Interleukin enhancer-binding factor 3 homolog isoform X1.
     
  0.641
hoxb6aa
Homeobox protein HoxB6aa.
   
 
 0.621
hoxb6ab
Homeobox protein HoxB6ab.
   
 
 0.621
hoxb6ba
Homeobox protein HoxB6ba.
   
 
 0.621
LOC106589285
Homeobox protein Hox-B6b-like.
   
 
 0.621
hxb7a
Homeobox protein Hox-B7a.
   
 
 0.557
hoxb7ab
Homeobox protein HoxB7ab.
   
 
 0.557
hoxc6ab
Homeobox protein HoxC6ab.
   
 
 0.557
LOC106609923
Fibrinogen gamma chain-like.
      
 0.544
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.