Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106608837Ubiquitin carboxyl-terminal hydrolase. (802 aa)    
Predicted Functional Partners:
LOC106612584
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
   
  
 0.655
LOC106580884
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.655
LOC106604789
F-box/WD repeat-containing protein 11-like isoform X1.
    
 
 0.641
LOC106603254
F-box/WD repeat-containing protein 11-like.
    
 
 0.641
LOC106605084
Platelet-activating factor acetylhydrolase IB subunit alpha-like isoform X1.
    
 
 0.641
LOC106611815
F-box/WD repeat-containing protein 11 isoform X4.
    
 
 0.641
LOC106568099
F-box/WD repeat-containing protein 11-like.
    
 
 0.641
LOC106562595
Elongation factor Tu GTP-binding domain-containing protein 1-like isoform X1.
   
 
  0.515
LOC106587794
Elongation factor Tu GTP-binding domain-containing protein 1-like.
   
 
  0.515
eftud1
Elongation factor Tu GTP-binding domain-containing protein 1.
   
 
  0.515
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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