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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564272Afadin- and alpha-actinin-binding protein-like. (462 aa)    
Predicted Functional Partners:
AFDN
Afadin-like isoform X5.
    
  0.902
LOC106603236
Afadin-like.
    
  0.902
LOC106600942
Alpha-actinin-1-like isoform X3.
     
  0.900
actn4
Alpha-actinin-4 isoform X1.
     
  0.900
LOC106612603
Alpha-actinin-4 isoform X3.
     
  0.900
fto
Alpha-ketoglutarate-dependent dioxygenase FTO isoform X1.
     
 0.648
LOC106587580
Alpha-ketoglutarate-dependent dioxygenase FTO-like.
     
 0.648
LOC106612524
Ribonuclease T2-like; Belongs to the RNase T2 family.
      
 0.593
LOC106589819
Ribonuclease T2-like isoform X1; Belongs to the RNase T2 family.
      
 0.593
mgmt
methylated-DNA--protein-cysteine methyltransferase isoform X1.
  
  
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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