Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564272Afadin- and alpha-actinin-binding protein-like. (462 aa)    
Predicted Functional Partners:
ssx2ip
Afadin- and alpha-actinin-binding protein isoform X1.
     
  0.942
LOC106600421
Afadin- and alpha-actinin-binding protein-like isoform X1.
     
  0.915
LOC106569307
Afadin- and alpha-actinin-binding protein-like isoform X2.
     
  0.915
AFDN
Afadin-like isoform X5.
    
  0.881
LOC106603236
Afadin-like.
    
  0.881
mllt4
Afadin isoform X1.
    
  0.881
LOC106607666
Alpha-actinin-2-like.
     
  0.753
ENSSSAP00000018926
annotation not available
     
  0.753
LOC106590972
Alpha-actinin-2-like.
     
  0.753
actn3
LOW QUALITY PROTEIN: alpha-actinin-3.
     
  0.753
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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