Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hoxb6abHomeobox protein HoxB6ab. (227 aa)    
Predicted Functional Partners:
hxb7a
Homeobox protein Hox-B7a.
   
 
 0.917
hoxb7ab
Homeobox protein HoxB7ab.
   
 
 0.917
hoxc6ab
Homeobox protein HoxC6ab.
   
 
 0.917
hoxa7aa
Homeobox protein Hox-A7; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.
   
   0.872
hoxb5aa
Homeobox protein Hox-B5a-like.
   
 
 0.839
hoxb4aa
Salmo salar homeobox protein HoxB4ab (hoxb4ab), mRNA.
   
 
 0.839
hoxb5
Homeobox protein HoxB5ba.
   
 
 0.839
LOC106589284
Homeobox protein Hox-B5b-like.
   
 
 0.839
LOC106564206
pre-B-cell leukemia transcription factor 1-like.
    
 0.739
LOC106607421
pre-B-cell leukemia transcription factor 1-like isoform X1.
    
 0.739
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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