STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575553Cytidine and dCMP deaminase domain-containing protein 1-like isoform X1. (520 aa)    
Predicted Functional Partners:
LOC106598843
Thymidine phosphorylase-like.
    
 0.880
TYMS
Thymidylate synthetase.
  
 
 0.865
tyms
Thymidylate synthase.
  
 
 0.865
LOC106591566
Thymidine kinase.
  
 
 0.801
kith
Thymidine kinase.
  
 
 0.801
ENSSSAP00000018283
Thymidine kinase 1, soluble.
  
 
 0.801
nud15
Probable 7,8-dihydro-8-oxoguanine triphosphatase NUDT15; Belongs to the Nudix hydrolase family.
    
 0.708
NUDT15
Probable 8-oxo-dGTP diphosphatase NUDT15; Belongs to the Nudix hydrolase family.
    
 0.708
cmpk2
Thymidylate kinase.
    
 0.689
LOC100195817
Thymidylate kinase.
    
 0.689
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.