STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012167Nanos homolog 3. (176 aa)    
Predicted Functional Partners:
dnd1
Dead end.
    
 
 0.879
piwil1
Piwi-like protein 1; Belongs to the argonaute family.
   
 
 0.879
dazl
Deleted in azoospermia-like.
    
 
 0.858
LOC106570536
Deleted in azoospermia-like isoform X1.
    
 
 0.858
LOC106602533
Tudor domain-containing protein 7B-like.
   
  
 0.779
ddx4
Vasa; Belongs to the DEAD box helicase family.
    
 
 0.768
LOC106569294
Uncharacterized protein LOC106569294.
      
 0.697
LOC106590452
Pancreas/duodenum homeobox protein 1-like.
      
 0.664
LOC106575298
Grancalcin-like.
      
 0.643
gran
Grancalcin.
      
 0.643
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.