STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608169Cell growth regulator with RING finger domain protein 1-like. (384 aa)    
Predicted Functional Partners:
LOC106611361
Cell growth regulator with EF hand domain protein 1-like.
      
 0.577
LOC106603201
Cell growth regulator with EF hand domain protein 1-like isoform X1.
      
 0.577
ATG7
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
     
 0.542
ube2g2
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.502
LOC106572411
NEDD8-activating enzyme E1 catalytic subunit-like isoform X3.
     
 0.491
uba3
NEDD8-activating enzyme E1 catalytic subunit isoform X1.
     
 0.491
UBA3
NEDD8-activating enzyme E1 catalytic subunit isoform X2.
     
 0.491
ube2j1
Ubiquitin-conjugating enzyme E2 J1.
    
 0.468
LOC106571293
Ubiquitin-conjugating enzyme E2 J1-like isoform X2.
    
 0.468
tmem181
Transmembrane protein 181 isoform X1.
      
 0.448
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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