STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRICKLE1Prickle-like protein 1. (895 aa)    
Predicted Functional Partners:
LOC106575319
Vang-like protein.
    
 0.914
VANGL1
Vang-like protein.
    
 0.914
LOC106569379
Vang-like protein.
    
 0.910
LOC106609014
Vang-like protein.
    
 0.910
LOC106577852
Vang-like protein.
    
 0.910
VANGL2
Vang-like protein.
    
 0.910
LOC106602818
Segment polarity protein dishevelled homolog DVL-2-like isoform X2.
    
 0.903
LOC106608773
Segment polarity protein dishevelled homolog DVL-2-like.
    
 0.903
LOC106572388
Segment polarity protein dishevelled homolog DVL-1-like isoform X3.
    
 0.883
dvl1
Segment polarity protein dishevelled homolog DVL-1 isoform X1.
    
 0.883
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.