STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012191annotation not available (226 aa)    
Predicted Functional Partners:
LOC106561819
Guanine nucleotide exchange factor for Rab-3A-like isoform X4.
    
 0.715
LOC106584776
Guanine nucleotide exchange factor for Rab-3A-like isoform X1.
    
 0.715
LOC106609608
Exocyst complex component 4-like isoform X1.
    
 0.663
LOC106602942
Rab proteins geranylgeranyltransferase component A 2-like isoform X1.
    
 0.647
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.618
LOC106565422
Guanine nucleotide exchange factor MSS4-like.
    
 
 0.606
EXOC1
Exocyst complex component 1-like isoform X1.
   
 0.579
exoc1
Exocyst complex component 1 isoform X1.
   
 0.579
exoc2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.571
EXOC2
Exocyst complex component 2.
    
 0.571
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.