Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
spp2Secreted phosphoprotein 24; Could coordinate an aspect of bone turnover. (196 aa)    
Predicted Functional Partners:
LOC106598792
alpha-2-HS-glycoprotein-like.
   
  
 0.825
apom
Apolipoprotein M; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.732
LOC106608433
Fibrinogen alpha chain-like.
   
  
 0.725
LOC106578169
Fibrinogen alpha chain-like.
   
  
 0.725
apoh
Beta-2-glycoprotein 1 precursor.
   
 
 0.686
hgd
Homogentisate 1,2-dioxygenase.
   
    0.678
ENSSSAP00000112806
Homogentisate 1,2-dioxygenase.
   
    0.678
RAD1
Cell cycle checkpoint protein RAD1.
      
 0.672
tetn
Tetranectin precursor.
   
 
 0.627
ENSSSAP00000080899
annotation not available
   
 
 0.627
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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