STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spp2Secreted phosphoprotein 24; Could coordinate an aspect of bone turnover. (196 aa)    
Predicted Functional Partners:
LOC106598792
alpha-2-HS-glycoprotein-like.
   
  
 0.787
apom
Apolipoprotein M; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.754
apoh
Beta-2-glycoprotein 1 precursor.
   
 
 0.687
LOC106609787
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.666
LOC106589575
Extracellular serine/threonine protein kinase FAM20C-like.
    
  0.666
tetn
Tetranectin precursor.
   
 
 0.643
ENSSSAP00000080899
annotation not available
   
 
 0.643
LOC106570071
Tetranectin-like.
   
 
 0.643
proc
Vitamin K-dependent protein C.
   
 
 0.640
LOC106608433
Fibrinogen alpha chain-like.
   
  
 0.631
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.