STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pecrPeroxisomal Trans-2-enoyl-CoA reductase. (304 aa)    
Predicted Functional Partners:
amacr
alpha-methylacyl-CoA racemase.
   
 0.716
LOC100380782
Peroxisomal acyl-coenzyme A oxidase 1.
  
 0.705
dhso
Sorbitol dehydrogenase.
  
 
 0.684
ECHP
Peroxisomal bifunctional enzyme.
  
 0.665
LOC106588673
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.644
peci
Peroxisomal 3,2-trans-enoyl-CoA isomerase isoform X1.
  
 0.640
LOC106590083
enoyl-CoA delta isomerase 2, mitochondrial-like isoform X1.
  
 0.635
ENSSSAP00000041197
Enoyl CoA hydratase 1, peroxisomal.
   
 0.629
LOC106579756
3-ketoacyl-CoA thiolase B, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.624
acaa1
3-ketoacyl-CoA thiolase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.624
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.