STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pecrPeroxisomal Trans-2-enoyl-CoA reductase. (304 aa)    
Predicted Functional Partners:
dhso
Sorbitol dehydrogenase.
  
 
 0.786
ENSSSAP00000054046
annotation not available
  
 0.772
ECHP
Peroxisomal bifunctional enzyme.
  
 0.772
peci
Peroxisomal 3,2-trans-enoyl-CoA isomerase isoform X1.
  
 0.761
LOC106590083
enoyl-CoA delta isomerase 2, mitochondrial-like isoform X1.
  
 0.761
LOC100380782-2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.753
LOC100380782
Peroxisomal acyl-coenzyme A oxidase 1.
  
 0.753
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.736
LOC106579756
3-ketoacyl-CoA thiolase B, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.732
acaa1
3-ketoacyl-CoA thiolase, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.732
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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