Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ankrd16Ankyrin repeat domain-containing protein 16. (367 aa)    
Predicted Functional Partners:
pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
 0.700
LOC106584003
Arginine/serine-rich protein PNISR-like isoform X3.
   
 0.700
fbh1
F-box only protein 18 isoform X1.
     
 0.697
rbm17
Splicing factor 45 isoform X1.
    
 
 0.662
ENSSSAP00000105591
RNA binding motif protein 17.
    
 
 0.662
CEL-2
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
     
 0.658
LOC106611035
Iron-sulfur cluster assembly 2 homolog, mitochondrial-like.
      
 0.642
LOC106591720
Iron-sulfur cluster assembly 2 homolog, mitochondrial-like.
      
 0.642
aars1
Alanyl-tRNA synthetase, cytoplasmic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
    
 
 0.609
ENSSSAP00000029344
annotation not available
    
 
 0.572
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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