Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106609408Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (216 aa)    
Predicted Functional Partners:
LOC106574738
Peripheral plasma membrane protein CASK-like.
    
 0.942
ENSSSAP00000105696
Calcium/calmodulin-dependent serine protein kinase b.
    
 0.942
cask
Peripheral plasma membrane protein CASK isoform X10; Belongs to the MAGUK family.
    
 0.942
CASK
Peripheral plasma membrane protein CASK-like isoform X11; Belongs to the MAGUK family.
    
 0.942
ENSSSAP00000026044
Molybdenum cofactor synthesis 3.
   
 0.934
ENSSSAP00000008900
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.868
mpp1
55 kDa erythrocyte membrane protein; Belongs to the MAGUK family.
    
 0.868
LOC106563481
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 0.846
LOC106603145
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
    
 0.846
LOC106607467
MAGUK p55 subfamily member 2-like; Belongs to the MAGUK family.
    
 0.796
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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