STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564485Transmembrane protein 119-like. (202 aa)    
Predicted Functional Partners:
LOC106570128
Apolipoprotein Eb-like.
      
 0.597
cst7
cystatin-F isoform X1.
      
 0.596
aif1
Allograft inflammatory factor 1.
      
 0.562
LOC106613310
p2Y purinoceptor 12-like.
      
 0.555
LOC106581495
p2Y purinoceptor 12-like.
      
 0.555
LOC106604443
Ankyrin repeat domain-containing protein SOWAHC-like.
    
 
 0.542
ENSSSAP00000104266
Ankyrin repeat and death domain containing 1A.
    
 
 0.542
spa17
Sperm surface protein Sp17 isoform X1.
      
 0.529
LOC106605479
C-C chemokine receptor type 5-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.511
LOC106579851
C-C chemokine receptor type 4-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.