STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575873Gamma-crystallin B-like; Belongs to the beta/gamma-crystallin family. (179 aa)    
Predicted Functional Partners:
ENSSSAP00000110015
Otospiralin.
      
 0.581
LOC106579496
Otospiralin-like.
      
 0.581
stx16
Syntaxin-16 isoform X2; Belongs to the syntaxin family.
      
 0.557
LOC106565427
Syntaxin-16-like isoform X2; Belongs to the syntaxin family.
      
 0.557
LOC106571908
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.544
LOC106566752
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.544
slc6a1
Solute carrier family 6 member 1.
      
 0.544
LOC106566236
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.544
ENSSSAP00000038091
annotation not available
   
 
 0.489
LOC106574754
Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.489
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.