STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569723Elongation factor 1-delta-like isoform X1; Belongs to the EF-1-beta/EF-1-delta family. (292 aa)    
Predicted Functional Partners:
ef-1g
Elongation factor 1-gamma.
   
 0.999
ENSSSAP00000065087
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
LOC106605401
valine--tRNA ligase-like isoform X3; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.984
LOC106579727
valine--tRNA ligase-like isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.984
ef1b
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
  
0.978
LOC106575720
Elongation factor 1-beta-like; Belongs to the EF-1-beta/EF-1-delta family.
  
0.978
mars
methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.912
rpl18
60S ribosomal protein L18.
   
 
 0.898
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.885
ENSSSAP00000066108
annotation not available
   
 0.863
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.