STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106575866Gamma-crystallin M2-like; Belongs to the beta/gamma-crystallin family. (175 aa)    
Predicted Functional Partners:
ENSSSAP00000038091
annotation not available
   
 
 0.489
LOC106574754
Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.489
LOC106607462
Growth hormone 2.
   
    0.451
LOC100136491
Somatolactin precursor.
   
    0.451
LOC100136588
Somatotropin; Growth hormone plays an important role in growth control and is involved in the regulation of several anabolic processes. Implicated as an osmoregulatory substance important for seawater adaptation; Belongs to the somatotropin/prolactin family.
   
    0.451
LOC100196589
Somatolactin beta precursor.
   
    0.451
ENSSSAP00000082258
annotation not available
   
    0.451
cpo
Carboxypeptidase O isoform X2.
      
 0.429
cpb2
Carboxypeptidase B2.
      
 0.429
HS6ST3
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.429
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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