STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012343annotation not available (59 aa)    
Predicted Functional Partners:
LOC106583414
Zinc finger matrin-type protein 1-like isoform X3.
      
 0.601
ENSSSAP00000041695
annotation not available
  
 
 
 0.567
LOC106592754
Paired box protein Pax-5-like.
  
 
 
 0.565
PAX2
Paired box 2.
  
 
 
 0.560
ENSSSAP00000094576
annotation not available
    
 
 0.532
gnb1l
Guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1.
    
 
 0.532
ENSSSAP00000012834
annotation not available
  
 
 
 0.529
ENSSSAP00000022362
annotation not available
  
 
 
 0.529
ENSSSAP00000038537
annotation not available
  
 
 
 0.529
slc25a1
Tricarboxylate transport protein, mitochondrial; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.511
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.