STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012345annotation not available (189 aa)    
Predicted Functional Partners:
LOC106578539
rRNA 2'-O-methyltransferase fibrillarin-like.
   
 
 0.729
fbrl
Salmo salar rRNA 2-O-methyltransferase fibrillarin (fbrl), mRNA.
   
 
 0.729
bysl
Bystin-like.
   
 0.704
ENSSSAP00000118277
annotation not available
   
 0.704
LOC106581168
LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog.
   
 0.688
LOC106613038
pre-rRNA-processing protein TSR1 homolog.
   
 0.688
TR112
TRM112-like protein.
   
 0.684
ENSSSAP00000067342
annotation not available
   
 0.684
rs2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.669
RPS2
Ribosomal protein S2.
    
 0.669
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.