STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012346BCL-6 corepressor-like. (534 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
   
 0.888
SKP1-2
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.888
LOC106606294
Polycomb group RING finger protein 6-like isoform X3.
    
 0.860
pcgf6
Polycomb group RING finger protein 6.
    
 0.860
LOC106611618
Polycomb group RING finger protein 1-like isoform X2.
    
 0.860
kdm2a
Lysine-specific demethylase 2A isoform X1.
   
 0.682
LOC106579932
Lysine-specific demethylase 2B-like.
   
 0.682
kdm2b
Lysine-specific demethylase 2B isoform X5.
   
 0.682
LOC106604673
Lysine-specific demethylase 2A-like.
   
 0.682
LOC106602582
Lysine-specific demethylase 2A-like isoform X5.
   
 0.682
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.