STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012346BCL-6 corepressor-like. (534 aa)    
Predicted Functional Partners:
LOC106606294
Polycomb group RING finger protein 6-like isoform X3.
    
 
 0.857
pcgf6
Polycomb group RING finger protein 6.
    
 
 0.857
LOC106611618
Polycomb group RING finger protein 1-like isoform X2.
    
 
 0.857
LOC106604628
Polycomb group RING finger protein 3-like.
    
 
 0.852
PCGF3
Polycomb group RING finger protein 3.
    
 
 0.852
Cbx6
Chromobox protein 6.
    
   0.839
LOC106582152
BCL-6 corepressor-like isoform X1.
    
  0.814
LOC106611712
BCL-6 corepressor-like protein 1.
    
  0.814
ENSSSAP00000097268
BCL-6 corepressor-like.
    
  0.814
LOC106604760
BCL-6 corepressor-like protein 1 isoform X1.
    
  0.814
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.