STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106607485Chromobox protein homolog 1-like. (237 aa)    
Predicted Functional Partners:
ENSSSAP00000060040
annotation not available
   
 0.869
e2f6
Transcription factor E2F6 isoform X1.
   
 0.869
l3mbtl2
Lethal(3)malignant brain tumor-like protein 2 isoform X1.
    
 0.822
MBTD1
MBT domain-containing protein 1-like isoform X1.
    
 0.822
LOC106600809
MBT domain-containing protein 1-like isoform X1.
    
 0.822
LOC106589448
MBT domain-containing protein 1-like isoform X1.
    
 0.822
LOC106578892
MBT domain-containing protein 1-like.
    
 0.822
LOC106606294
Polycomb group RING finger protein 6-like isoform X3.
   
 0.814
pcgf6
Polycomb group RING finger protein 6.
   
 0.814
LOC106611618
Polycomb group RING finger protein 1-like isoform X2.
   
 0.814
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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