STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573927Microtubule-associated protein 1B-like. (1394 aa)    
Predicted Functional Partners:
LOC106604959
Fragile X mental retardation protein 1 homolog B-like isoform X2.
    
 
 0.531
LOC106611992
Fragile X mental retardation protein 1 homolog A-like isoform X4.
    
 
 0.531
fxr1
Fragile X mental retardation syndrome-related protein 1 isoform X1.
    
 
 0.496
LOC106577688
Fragile X mental retardation syndrome-related protein 1-like isoform X2.
    
 
 0.496
LOC106608729
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.496
ENSSSAP00000057627
Microtubule-associated protein 1 light chain 3 beta.
    
 
 0.405
map1lc3b
Microtubule-associated proteins 1A/1B light chain 3B isoform X1.
    
 
 0.405
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 
 0.405
rassf1
Ras association domain-containing protein 1 isoform X1.
    
 
 0.403
LOC106565172
Ras association domain-containing protein 1-like isoform X1.
    
 
 0.403
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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