STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573927Microtubule-associated protein 1B-like. (1394 aa)    
Predicted Functional Partners:
LOC106562968
Microtubule-associated protein 1B-like.
     
  0.815
LOC106568716
Microtubule-associated protein 1B-like.
     
  0.815
LOC106604959
Fragile X mental retardation protein 1 homolog B-like isoform X2.
    
 
 0.704
LOC106611992
Fragile X mental retardation protein 1 homolog A-like isoform X4.
    
 
 0.704
fxr1
Fragile X mental retardation syndrome-related protein 1 isoform X1.
    
 
 0.672
LOC106577688
Fragile X mental retardation syndrome-related protein 1-like isoform X2.
    
 
 0.672
LOC106608729
Fragile X mental retardation syndrome-related protein 1-like.
    
 
 0.672
LOC106610435
Polyadenylate-binding protein-interacting protein 2B-like isoform X2.
      
 0.641
pai2b
Polyadenylate-binding protein-interacting protein 2B.
      
 0.641
ENSSSAP00000057627
Microtubule-associated protein 1 light chain 3 beta.
    
 
 0.607
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.