Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106569365Complement C3-like isoform X1. (1642 aa)    
Predicted Functional Partners:
LOC106572045
Properdin-like.
   
 0.904
LOC106566833
Properdin-like.
   
 0.904
c5
Complement C5.
   
 0.867
cfhr5
LOW QUALITY PROTEIN: complement factor H-related protein 5.
   
 0.858
LOC106560552
Complement factor H-like.
   
 0.858
LOC106595673
Complement factor H-like.
   
 0.858
cd55
Complement decay-accelerating factor isoform X7.
    
 0.843
C1QC-2
Complement C1q subcomponent subunit C-like.
   
 0.822
c9
Complement component C9.
   
 0.772
c8a
Complement component C8 alpha chain.
   
 0.740
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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