STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609634IQ motif and SEC7 domain-containing protein 3-like isoform X1. (1210 aa)    
Predicted Functional Partners:
TMEM236
Transmembrane protein 236-like.
      
 0.598
TMEM236-2
Transmembrane protein 236-like.
      
 0.598
LOC106562142
UPF0583 protein C15orf59 homolog.
      
 0.596
LOC106574852
Uncharacterized protein LOC106574852 isoform X2.
      
 0.596
ENSSSAP00000037371
Probable GPI-anchored adhesin-like protein PGA55.
      
 0.596
LOC106587233
UPF0583 protein C15orf59 homolog.
      
 0.596
erich3
Glutamate-rich protein 3.
      
 0.593
LOC106567667
Protein phosphatase 1E-like.
   
  
 0.566
ppm1e
Protein phosphatase 1E.
   
  
 0.566
LOC106581613
E3 ubiquitin-protein ligase MYCBP2-like.
    
 
 0.565
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.