STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106576548Poly [ADP-ribose] polymerase. (328 aa)    
Predicted Functional Partners:
parp16
Poly [ADP-ribose] polymerase.
      
 0.573
LOC106582088
Poly [ADP-ribose] polymerase.
      
 0.573
parp2
Poly [ADP-ribose] polymerase.
      
 0.542
adprhl2
PolyADP-ribose glycohydrolase ARH3.
      
 0.438
LOC106565440
Plasticin-like; Belongs to the intermediate filament family.
      
 0.438
prph
Plasticin; Belongs to the intermediate filament family.
      
 0.438
ENSSSAP00000017829
annotation not available
      
 0.437
Parp3
Poly (ADP-ribose) polymerase family, member 3.
      
 0.437
LOC106565577
Poly [ADP-ribose] polymerase.
      
 0.437
xrcc4
DNA repair protein XRCC4 isoform X2.
    
 
 0.430
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.