close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572051Protein Shroom3-like isoform X9. (1967 aa)    
Predicted Functional Partners:
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize (By similarity); Belongs to the actin family. ARP8 subfamily.
    
 0.782
ELFN2
Protein phosphatase 1 regulatory subunit 29-like.
   
 0.780
gtf2h3
General transcription factor IIH subunit 3.
    
 0.691
acl6b
Actin-like protein 6B isoform X1; Belongs to the actin family.
   
 0.668
LOC106574142
Actin-like protein 6B; Belongs to the actin family.
   
 0.668
dusp11
RNA/RNP complex-1-interacting phosphatase isoform X1.
     
 0.662
LOC100196672
General transcription factor IIH subunit.
    
 0.658
ENSSSAP00000040349
annotation not available
    
 0.648
ercc3
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.647
Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.647
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.