STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106573411Receptor-interacting serine/threonine-protein kinase 3-like; Belongs to the protein kinase superfamily. (365 aa)    
Predicted Functional Partners:
LOC106599735
Receptor-interacting serine/threonine-protein kinase 1-like isoform X1.
  
 
0.998
ripk1
Receptor-interacting serine/threonine-protein kinase 1.
  
 
0.998
LOC106586254
Caspase-8-like isoform X1; Belongs to the peptidase C14A family.
   
 0.991
LOC106569473
Caspase-8-like isoform X1; Belongs to the peptidase C14A family.
   
 0.986
LOC106587129
FAS-associated death domain protein-like.
   
 0.968
LOC106561969
FAS-associated death domain protein-like.
   
 0.968
LOC106610821
Tumor necrosis factor alpha-induced protein 3-like.
   
 0.959
tnfaip3
Tumor necrosis factor alpha-induced protein 3 isoform X2.
   
 0.959
mlkl
Mixed lineage kinase domain-like protein.
    
0.958
LOC106584536
Mixed lineage kinase domain-like protein.
    
0.958
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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