Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC10660589940S ribosomal protein S27-like. (117 aa)    
Predicted Functional Partners:
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.992
Fau
Small subunit ribosomal protein S30e.
   
 0.986
rs30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.986
ENSSSAP00000052427
annotation not available
   
 0.986
ENSSSAP00000060568
annotation not available
   
 0.986
ubim
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.986
fau
annotation not available
   
 0.986
ENSSSAP00000113801
annotation not available
   
 0.986
rs8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.985
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.985
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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