STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605414Protein cordon-bleu-like isoform X5. (1510 aa)    
Predicted Functional Partners:
JMY
Junction-mediating and -regulatory protein-like.
    
 0.566
JMY-2
Junction-mediating and -regulatory protein-like.
    
 0.566
rnf32
RING finger protein 32 isoform X1.
      
 0.555
LOC106587257
Paraplegin-like isoform X1.
      
 0.552
LOC106562177
Paraplegin-like.
      
 0.552
akap12
A-kinase anchor protein 12 isoform X1.
      
 0.548
LOC106571757
A-kinase anchor protein 12-like.
      
 0.548
ENSSSAP00000004990
Si:ch211-175f11.5.
      
 0.529
dnajc28
dnaJ homolog subfamily C member 28.
      
 0.483
LOC106561921
Homeobox protein DBX1-A-like.
      
 0.479
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.