STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579689V-set and transmembrane domain-containing protein 2A-like. (235 aa)    
Predicted Functional Partners:
pdyn
Beta-neoendorphin-dynorphin.
   
  
 0.509
sumf2
Sulfatase-modifying factor 2 isoform X1.
      
 0.502
LOC106590555
Protein transport protein Sec61 subunit gamma.
      
 0.434
sc61g
Protein transport protein Sec61 subunit gamma-like.
      
 0.434
sc61g-2
Transport protein Sec61 subunit gamma.
      
 0.434
pdzd3
Na(+)/H(+) exchange regulatory cofactor NHE-RF4.
      
 0.422
LOC106612428
Na(+)/H(+) exchange regulatory cofactor NHE-RF3-like.
      
 0.422
LOC106573750
Membrane-bound transcription factor site-1 protease-like.
      
 0.400
LOC106560820
Membrane-bound transcription factor site-1 protease-like isoform X2.
      
 0.400
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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