Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106603431Rhomboid domain-containing protein 2-like isoform X1. (409 aa)    
Predicted Functional Partners:
LOC106584447
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.612
LOC106613757
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 
 0.612
LOC106613706
Cystinosin-like.
    
   0.600
LOC106573556
Cystinosin-like isoform X1.
    
   0.600
pigl
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
     
  0.591
ENSSSAP00000092483
annotation not available
      
 0.587
rhbdd3
Rhomboid domain-containing protein 3.
      
 0.586
ENSSSAP00000005176
annotation not available
      
 0.549
brox
BRO1 domain-containing protein BROX isoform X1.
      
 0.549
habp2
Hyaluronan-binding protein 2 isoform X1.
    
 
 0.545
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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