STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106564547Centromere protein M-like isoform X1. (185 aa)    
Predicted Functional Partners:
ENSSSAP00000062401
annotation not available
   
 0.995
LOC106587408
Retinitis pigmentosa 1-like 1 protein isoform X1.
   
 0.991
cenpp
Centromere protein P.
   
 0.991
LOC106588720
Centromere protein K-like isoform X4.
   
 0.988
LOC106586549
Centromere protein K-like.
   
 0.988
LOC106562296
Centromere protein N-B-like.
   
 0.983
cenpn
Centromere protein N.
   
 0.983
CENPQ
Centromere protein Q.
    
 0.981
ENSSSAP00000017013
annotation not available
    
 0.981
LOC106611716
Centromere protein I-like isoform X1.
   
 0.981
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.