Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106609570Troponin I, slow skeletal muscle-like isoform X2. (191 aa)    
Predicted Functional Partners:
LOC106566026
Troponin I, slow skeletal muscle-like.
  
  
 
0.911
LOC106582713
Troponin I, slow skeletal muscle-like isoform X2.
  
  
 
0.911
LOC106576067
Troponin T, cardiac muscle-like isoform X4.
  
 0.897
LOC100136357
Fast myotomal muscle troponin-T.
  
 0.896
LOC106582714
Troponin T, cardiac muscle isoforms-like isoform X2.
  
 0.891
LOC106561647
Troponin T, cardiac muscle isoforms-like.
  
 0.891
LOC106561651
Troponin I, cardiac muscle-like.
  
  
 
0.889
LOC106573150
Troponin I, slow skeletal muscle-like isoform X1.
  
  
 
0.887
tnni3
Troponin I, cardiac muscle.
  
  
 
0.887
LOC106600945
Troponin T, slow skeletal muscle-like isoform X5.
   
 0.868
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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