STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580024SH2 domain-containing protein 3C-like isoform X1. (925 aa)    
Predicted Functional Partners:
LOC106570363
Enhancer of filamentation 1-like.
    
 0.700
LOC106560839
Breast cancer anti-estrogen resistance protein 1-like isoform X2.
    
 0.700
LOC106589023
Enhancer of filamentation 1-like.
    
 0.700
LOC106573733
Breast cancer anti-estrogen resistance protein 1-like isoform X3.
    
 0.700
LOC106608851
Embryonal Fyn-associated substrate-like isoform X1.
    
 0.658
LOC106577796
Embryonal Fyn-associated substrate-like.
    
 0.658
LOC106613126
Potassium voltage-gated channel subfamily E member 4-like.
     
 0.595
kcne4
Potassium Voltage-gated channel subfamily E member 4.
     
 0.595
tulp4
Tubby-related protein 4 isoform X2; Belongs to the TUB family.
     
 0.566
LOC106602875
Tubby-related protein 4-like; Belongs to the TUB family.
     
 0.566
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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