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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106580024SH2 domain-containing protein 3C-like isoform X1. (925 aa)    
Predicted Functional Partners:
LOC106570363
Enhancer of filamentation 1-like.
    
 0.655
LOC106560839
Breast cancer anti-estrogen resistance protein 1-like isoform X2.
    
 0.655
LOC106589023
Enhancer of filamentation 1-like.
    
 0.655
LOC106573733
Breast cancer anti-estrogen resistance protein 1-like isoform X3.
    
 0.655
LOC106608851
Embryonal Fyn-associated substrate-like isoform X1.
    
 0.525
LOC106577796
Embryonal Fyn-associated substrate-like.
    
 0.525
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.448
irf-3
Interferon regulatory factor 3 isoform X1.
    
 0.440
ppih
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.425
LOC106613863
Pleckstrin homology domain-containing family B member 2-like isoform X1.
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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