STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106563456Fermitin family homolog 3-like. (670 aa)    
Predicted Functional Partners:
LOC106586391
Integrin beta; Belongs to the integrin beta chain family.
   
 0.831
LOC106582337
Integrin beta; Belongs to the integrin beta chain family.
   
 0.831
LOC106600998
Integrin beta-3-like.
   
 0.819
LOC106579149
Integrin beta; Belongs to the integrin beta chain family.
   
 0.819
LOC106607266
Integrin beta; Belongs to the integrin beta chain family.
   
 0.819
fbli1
Filamin-binding LIM protein 1.
    
 0.783
ILK
Integrin-linked protein kinase.
   
 
 0.740
ilk
Salmo salar integrin linked kinase (ilk), mRNA.
   
 
 0.740
ENSSSAP00000024682
annotation not available
   
 
 0.725
exosc10
Exosome component 10.
    
   0.711
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.