LOC106573413 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC106573413

C-Jun-amino-terminal kinase-interacting protein 2-like. (1271 aa)

Predicted Functional Partners:

LOC106564723

0.973

LOC106587435

0.973

LOC106604910

0.969

LOC106563760

0.969

ENSSSAP00000000211

0.954

LOC106560362

0.954

mapk10

0.954

mapk8

0.948

LOC106579004

0.948

LOC106576863

0.948

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000000211	LOC106563760	ENSSSAP00000000211	ENSSSAP00000088671	annotation not available	Mitogen-activated protein kinase.	0.980
ENSSSAP00000000211	LOC106564723	ENSSSAP00000000211	ENSSSAP00000009817	annotation not available	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.964
ENSSSAP00000000211	LOC106573413	ENSSSAP00000000211	ENSSSAP00000012473	annotation not available	C-Jun-amino-terminal kinase-interacting protein 2-like.	0.954
ENSSSAP00000000211	LOC106576863	ENSSSAP00000000211	ENSSSAP00000115769	annotation not available	Mitogen-activated protein kinase.	0.765
ENSSSAP00000000211	LOC106579004	ENSSSAP00000000211	ENSSSAP00000074575	annotation not available	Mitogen-activated protein kinase.	0.765
ENSSSAP00000000211	LOC106587435	ENSSSAP00000000211	ENSSSAP00000076634	annotation not available	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X1.	0.964
ENSSSAP00000000211	LOC106604910	ENSSSAP00000000211	ENSSSAP00000059694	annotation not available	Mitogen-activated protein kinase.	0.980
ENSSSAP00000000211	mapk8	ENSSSAP00000000211	ENSSSAP00000001404	annotation not available	Mitogen-activated protein kinase.	0.765
LOC106560362	LOC106563760	ENSSSAP00000001029	ENSSSAP00000088671	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.980
LOC106560362	LOC106564723	ENSSSAP00000001029	ENSSSAP00000009817	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.964
LOC106560362	LOC106573413	ENSSSAP00000001029	ENSSSAP00000012473	Mitogen-activated protein kinase.	C-Jun-amino-terminal kinase-interacting protein 2-like.	0.954
LOC106560362	LOC106576863	ENSSSAP00000001029	ENSSSAP00000115769	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.765
LOC106560362	LOC106579004	ENSSSAP00000001029	ENSSSAP00000074575	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.765
LOC106560362	LOC106587435	ENSSSAP00000001029	ENSSSAP00000076634	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X1.	0.964
LOC106560362	LOC106604910	ENSSSAP00000001029	ENSSSAP00000059694	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.980
LOC106560362	mapk8	ENSSSAP00000001029	ENSSSAP00000001404	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.765
LOC106563760	ENSSSAP00000000211	ENSSSAP00000088671	ENSSSAP00000000211	Mitogen-activated protein kinase.	annotation not available	0.980
LOC106563760	LOC106560362	ENSSSAP00000088671	ENSSSAP00000001029	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.980
LOC106563760	LOC106564723	ENSSSAP00000088671	ENSSSAP00000009817	Mitogen-activated protein kinase.	Dual specificity mitogen-activated protein kinase kinase 7-like isoform X2.	0.965
LOC106563760	LOC106573413	ENSSSAP00000088671	ENSSSAP00000012473	Mitogen-activated protein kinase.	C-Jun-amino-terminal kinase-interacting protein 2-like.	0.969