STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106579588Tomoregulin-1-like isoform X1. (362 aa)    
Predicted Functional Partners:
LOC106568657
PEX5-related protein-like isoform X4.
   
  
 0.651
LOC106574138
PEX5-related protein-like isoform X1.
   
  
 0.651
LOC106613494
PEX5-related protein-like.
   
  
 0.651
LOC106581884
C-X-C chemokine receptor type 1-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.633
LOC106579844
C-C chemokine receptor type 5-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.633
LOC106575635
C-X-C chemokine receptor type 1-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.628
LOC106605479
C-C chemokine receptor type 5-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.609
LOC106579893
C-C chemokine receptor type 5-like isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.609
LOC106579928
Apelin receptor A-like; Belongs to the G-protein coupled receptor 1 family.
      
 0.605
LOC106604844
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1-like isoform X1.
      
 0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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