STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106608164Zinc finger protein 36, C3H1 type-like 1 isoform X1. (346 aa)    
Predicted Functional Partners:
LOC106583822
MAP kinase-activated protein kinase 2-like isoform X1; Belongs to the protein kinase superfamily.
    
 0.927
LOC106571864
MAP kinase-activated protein kinase 2-like; Belongs to the protein kinase superfamily.
    
 0.927
LOC106566648
MAP kinase-activated protein kinase 2-like isoform X1; Belongs to the protein kinase superfamily.
    
 0.927
exosc8
Exosome complex component RRP43.
   
  0.886
LOC106599575
5'-3' exoribonuclease 1.
   
 0.884
LOC106568870
5'-3' exoribonuclease 1.
   
 0.884
LOC106605192
Zinc finger protein 36, C3H1 type-like 2-A.
     
  0.847
LOC106561350
CCR4-NOT transcription complex subunit 1-like isoform X11.
    
 0.818
ENSSSAP00000080004
CCR4-NOT transcription complex, subunit 1.
    
 0.818
dcp2
m7GpppN-mRNA hydrolase isoform X1.
   
 0.805
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.