STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106572095cyclin-I-like isoform X2; Belongs to the cyclin family. (407 aa)    
Predicted Functional Partners:
LOC106564750
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.771
LOC106587717
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.771
cdc27
Cell division cycle protein 27 homolog isoform X1.
   
 0.756
LOC106600875
Cell division cycle protein 27 homolog isoform X2.
   
 0.756
LOC106569348
Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.738
LOC106569348-2
Cyclin-dependent-like kinase 5.
    
 
 0.738
ENSSSAP00000028410
annotation not available
    
  0.734
ORC2
Origin recognition complex subunit 2.
   
 0.729
ENSSSAP00000105940
Extra spindle pole bodies like 1, separase.
   
 
 0.726
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.723
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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