STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000012485annotation not available (272 aa)    
Predicted Functional Partners:
ube2l3
Ubiquitin-conjugating enzyme E2 L3-like; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.752
LOC106612584
E3 ubiquitin-protein ligase TRIP12-like isoform X1.
   
 
 0.558
LOC106580884
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 
 0.558
ENSSSAP00000012141
annotation not available
  
     0.531
ZFAND4
AN1-type zinc finger protein 4-like.
    
  0.528
LOC106613273
AN1-type zinc finger protein 4-like.
    
  0.528
ubil
Salmo salar Ubiquitin-like protein (ubil), mRNA.
  
 
  0.524
ENSSSAP00000040139
annotation not available
  
 
  0.524
UBIL
Ubiquitin-like protein.
  
 
  0.507
LOC106606575
Baculoviral IAP repeat-containing protein 6-like isoform X14.
    
  0.494
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.